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  5. MA_18612g0010

MA_18612g0010


Description : (at2g12646 : 253.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 488.0) & (original description: no original description)


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_18612g0010
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
39612 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
A4A49_35786 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi1g35697 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi3g52170 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi5g19980 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G050480.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os08g44620 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00011861-RA No alias (at1g76590 : 176.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
Potri.002G144900 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.006G060500 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Solyc02g068510 No alias PLATZ transcription factor family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen07g003380 No alias PLATZ transcription factor 0.03 Orthogroups_2024-Update
Sopen08g025390 No alias PLATZ transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 122 193
No external refs found!