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  5. MA_189520g0010

MA_189520g0010


Description : (at2g18370 : 86.3) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, embryo, hypocotyl, male gametophyte, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 6 (TAIR:AT3G08770.1); Has 1059 Blast hits to 1058 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1055; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o23758|nltp_cicar : 82.8) Nonspecific lipid-transfer protein precursor (LTP) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 172.6) & (original description: no original description)


Gene families : OG_42_0000142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_189520g0010
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
A4A49_30556 No alias non-specific lipid-transfer protein 2 0.03 Orthogroups_2024-Update
Brara.C04371.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G010868 No alias lipid transfer protein 1 0.02 Orthogroups_2024-Update
MA_10432090g0010 No alias (q43767|nlt41_horvu : 102.0) Nonspecific lipid-transfer... 0.04 Orthogroups_2024-Update
PSME_00012229-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00057139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sopen09g010450 No alias Protease inhibitor/seed storage/LTP family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 30 115
No external refs found!