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  5. MA_192947g0010

MA_192947g0010


Description : (at5g53730 : 138.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G44220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)


Gene families : OG_42_0000387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_192947g0010
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
A4A49_09087 No alias uncharacterized protein 0.03 Orthogroups_2024-Update
Bradi5g26600 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Glyma.02G197600 No alias NDR1/HIN1-like 1 0.03 Orthogroups_2024-Update
MA_606673g0010 No alias (at5g22870 : 101.0) Late embryogenesis abundant (LEA)... 0.04 Orthogroups_2024-Update
MA_7708687g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.006G204200 No alias NDR1/HIN1-like 1 0.03 Orthogroups_2024-Update
Potri.012G006000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 97 196
No external refs found!