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  5. MA_193378g0010

MA_193378g0010


Description : (at1g31360 : 120.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)


Gene families : OG_42_0016608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0016608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_193378g0010
Cluster HCCA clusters: Cluster_232


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002121 HRDC_dom 74 137
No external refs found!