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  5. MA_194997g0010

MA_194997g0010


Description : (at1g24620 : 137.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (q9sdj0|calm3_orysa : 120.0) Calmodulin-3 (CaM-3) - Oryza sativa (Rice) & (reliability: 274.0) & (original description: no original description)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_194997g0010
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_36104 No alias calcium-binding allergen ole e 8 0.02 Orthogroups_2024-Update
At1g73630 No alias Probable calcium-binding protein CML26... 0.03 Orthogroups_2024-Update
Brara.G03253.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Brara.I03055.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Glyma.02G133000 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Glyma.05G085200 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.07G101100 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.11G056500 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.14G215800 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
MA_863010g0010 No alias (at1g24620 : 115.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
Potri.009G102500 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Sobic.003G425500.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sobic.009G120800.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sopen01g001390 No alias EF hand 0.03 Orthogroups_2024-Update
Sopen06g026250 No alias EF hand 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 74 132
IPR002048 EF_hand_dom 146 208
No external refs found!