- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at1g27930 : 128.0) Function unknown. Interacts with eIF3.; FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT1G67330.1); Has 251 Blast hits to 250 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 239; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)
Gene families : OG_42_0001492 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_195978g0010 | |
| Cluster | HCCA clusters: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g19030 | No alias | Protein of unknown function (DUF579) | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G255800 | No alias | Protein of unknown function (DUF579) | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G001600 | No alias | Protein of unknown function (DUF579) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021148 | Polysacc_synth_dom | 2 | 118 |
| No external refs found! |