1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_200041g0010

MA_200041g0010


Description : (at3g19380 : 209.0) plant U-box 25 (PUB25); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521 Blast hits to 2449 proteins in 133 species: Archae - 0; Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091; Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink). & (q64ha9|spl11_orysa : 140.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: no original description)


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_200041g0010
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
172230 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
A4A49_38562 No alias u-box domain-containing protein 27 0.03 Orthogroups_2024-Update
At3g18710 No alias RING-type E3 ubiquitin transferase... 0.05 Orthogroups_2024-Update
Bradi5g09720 No alias plant U-box 22 0.02 Orthogroups_2024-Update
Kfl00372_0100 kfl00372_0100_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_1663g0020 No alias (at3g19380 : 184.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_8030489g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.06 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.04 Orthogroups_2024-Update
Potri.016G069400 No alias plant U-box 22 0.05 Orthogroups_2024-Update
Pp1s109_251V6 No alias u-box domain-containing protein 0.02 Orthogroups_2024-Update
Seita.1G186200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G293600.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G274933.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.02 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.02 Orthogroups_2024-Update
Solyc04g071030 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g026970 No alias U-box domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 278 304
IPR003613 Ubox_domain 18 89
No external refs found!