1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g096190

Solyc01g096190


Description : Ca2+-ATPase


Gene families : OG_42_0001121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g096190
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G175900 No alias endomembrane-type CA-ATPase 4 0.02 Orthogroups_2024-Update
Pp1s80_36V6 No alias endoplasmic reticulum 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR008250 ATPase_P-typ_transduc_dom_A_sf 100 355
IPR004014 ATPase_P-typ_cation-transptr_N 9 76
IPR006068 ATPase_P-typ_cation-transptr_C 811 1036
No external refs found!