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Description : (at5g01110 : 261.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 237.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 490.0) & (original description: no original description)
Gene families : OG_42_0012203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012203_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_20129g0010 | |
| Cluster | HCCA clusters: Cluster_132 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| BP | GO:0030488 | tRNA methylation | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Predicted GO |
| BP | GO:0032259 | methylation | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| CC | GO:0034708 | methyltransferase complex | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
| CC | GO:1990234 | transferase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 475 | 503 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 331 |
| IPR002885 | Pentatricopeptide_repeat | 515 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 339 | 388 |
| IPR002885 | Pentatricopeptide_repeat | 591 | 632 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 458 |
| IPR002885 | Pentatricopeptide_repeat | 238 | 267 |
| No external refs found! |