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  5. MA_203992g0010

MA_203992g0010


Description : (at4g24780 : 544.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 377.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1088.0) & (original description: no original description)


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_203992g0010
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
407495 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_12542 No alias pectate lyase 0.05 Orthogroups_2024-Update
A4A49_16129 No alias putative pectate lyase 18 0.03 Orthogroups_2024-Update
A4A49_23917 No alias putative pectate lyase 13 0.03 Orthogroups_2024-Update
A4A49_26358 No alias putative pectate lyase p18 0.02 Orthogroups_2024-Update
A4A49_31246 No alias putative pectate lyase 12 0.04 Orthogroups_2024-Update
A4A49_35525 No alias putative pectate lyase 16 0.03 Orthogroups_2024-Update
At1g14420 No alias Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2] 0.03 Orthogroups_2024-Update
At1g30350 No alias Probable pectate lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G4] 0.04 Orthogroups_2024-Update
At3g07010 No alias Probable pectate lyase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Z8] 0.04 Orthogroups_2024-Update
Brara.C00647.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.G00648.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.G02558.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.I00410.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.I03611.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.I04991.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.J02392.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.K00935.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Glyma.08G296900 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Glyma.17G011200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G020200 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G075970.2 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
LOC_Os06g05260 No alias pectate lyase precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00000524-RA No alias (at4g24780 : 590.0) Pectin lyase-like superfamily... 0.05 Orthogroups_2024-Update
PSME_00009672-RA No alias (at5g48900 : 608.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00017512-RA No alias (at4g24780 : 545.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00019558-RA No alias (at4g13710 : 625.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00019559-RA No alias (at4g13710 : 600.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00019824-RA No alias (at1g67750 : 587.0) Pectate lyase family protein;... 0.03 Orthogroups_2024-Update
PSME_00029400-RA No alias (at5g63180 : 504.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00043773-RA No alias (at1g67750 : 590.0) Pectate lyase family protein;... 0.05 Orthogroups_2024-Update
PSME_00046544-RA No alias (at1g11920 : 429.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Potri.001G052300 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Potri.003G175900 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.008G148800 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Potri.008G182200 No alias Pectate lyase family protein 0.05 Orthogroups_2024-Update
Potri.011G008100 No alias root hair specific 14 0.04 Orthogroups_2024-Update
Potri.015G087800 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Pp1s173_162V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Pp1s1_550V6 No alias Pectate lyase precursor (ZePel) [Zinnia elegans] 0.03 Orthogroups_2024-Update
Pp1s204_112V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Pp1s409_2V6 No alias pectate lyase 0.04 Orthogroups_2024-Update
Pp1s84_82V6 No alias pectate lyase 0.02 Orthogroups_2024-Update
Pp1s92_84V6 No alias F12A21.12; pectate lyase family protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Sobic.004G091000.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Sobic.010G034200.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Solyc02g067450 No alias Pectate lyase (AHRD V3.3 *** M1A9L8_SOLTU) 0.03 Orthogroups_2024-Update
Solyc02g080910 No alias Pectate lyase (AHRD V3.3 *** K4B9W1_SOLLC) 0.03 Orthogroups_2024-Update
Solyc03g111690 No alias Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) 0.03 Orthogroups_2024-Update
Solyc03g113150 No alias Pectate lyase (AHRD V3.3 *** K4BKG8_SOLLC) 0.03 Orthogroups_2024-Update
Solyc05g055510 No alias Pectate lyase (AHRD V3.3 *** K4C2M7_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g006390 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen02g032420 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen03g012780 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen03g030810 No alias Pectate lyase 0.03 Orthogroups_2024-Update
Sopen05g003050 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen05g033960 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 167 330
No external refs found!