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  5. MA_206006g0010

MA_206006g0010


Description : (at4g08980 : 242.0) Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response.; F-BOX WITH WD-40 2 (FBW2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, posttranscriptional regulation of gene expression; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G05460.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 484.0) & (original description: no original description)


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_206006g0010
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Bradi1g61973 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G100100 No alias F-BOX WITH WD-40 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G070700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g52130 No alias OsFBX61 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.002G099100 No alias F-BOX WITH WD-40 2 0.04 Orthogroups_2024-Update
Seita.3G316900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G116200.1 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 188 210
IPR001611 Leu-rich_rpt 133 153
No external refs found!