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  5. MA_206687g0010

MA_206687g0010


Description : (at4g13270 : 105.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G52330.1); Has 193 Blast hits to 193 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 193; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)


Gene families : OG_42_0003314 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_206687g0010
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G077099 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os03g48950 No alias expressed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 110 204
No external refs found!