Description : (at2g13600 : 442.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 884.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_210089g0010 | |
Cluster | HCCA clusters: Cluster_156 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
106991 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
At2g03880 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Orthogroups_2024-Update | |
Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Brara.I02594.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
GRMZM2G163359 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g50280 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_28607g0010 | No alias | (at4g02750 : 763.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
MA_4503g0010 | No alias | (at2g27610 : 599.0) Tetratricopeptide repeat (TPR)-like... | 0.06 | Orthogroups_2024-Update | |
MA_52613g0020 | No alias | (at4g33170 : 570.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
PSME_00003163-RA | No alias | (at3g23330 : 192.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
PSME_00012885-RA | No alias | (at1g08070 : 603.0) Encodes a chloroplast RNA editing... | 0.05 | Orthogroups_2024-Update | |
PSME_00024326-RA | No alias | (at2g13600 : 445.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00035450-RA | No alias | (at4g33990 : 517.0) embryo defective 2758 (EMB2758);... | 0.06 | Orthogroups_2024-Update | |
PSME_00037812-RA | No alias | (at4g13650 : 600.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00056606-RA | No alias | (at3g03580 : 586.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
PSME_00057058-RA | No alias | (at3g12770 : 592.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
Potri.002G239600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.018G040100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s543_6V6 | No alias | hypothetical protein [Oryza sativa (japonica cultivar-group)] | 0.03 | Orthogroups_2024-Update | |
Seita.5G381200.1 | No alias | RNA editing factor *(CRR2) | 0.02 | Orthogroups_2024-Update | |
Sobic.009G250700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Predicted GO |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006754 | ATP biosynthetic process | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predicted GO |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Predicted GO |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predicted GO |
BP | GO:0046034 | ATP metabolic process | IEP | Predicted GO |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
No external refs found! |