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  5. MA_22179g0010

MA_22179g0010


Description : (at4g02750 : 672.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 161.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1344.0) & (original description: no original description)


Gene families : OG_42_0018058 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_22179g0010
Cluster HCCA clusters: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
PSME_00006931-RA No alias (at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 727 851
IPR002885 Pentatricopeptide_repeat 300 329
IPR002885 Pentatricopeptide_repeat 238 267
IPR002885 Pentatricopeptide_repeat 362 391
IPR002885 Pentatricopeptide_repeat 270 299
IPR002885 Pentatricopeptide_repeat 210 237
IPR002885 Pentatricopeptide_repeat 528 552
IPR002885 Pentatricopeptide_repeat 628 652
IPR002885 Pentatricopeptide_repeat 424 452
IPR002885 Pentatricopeptide_repeat 393 421
IPR002885 Pentatricopeptide_repeat 331 360
IPR002885 Pentatricopeptide_repeat 454 500
IPR002885 Pentatricopeptide_repeat 135 181
IPR002885 Pentatricopeptide_repeat 554 602
No external refs found!