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Description : (at3g46790 : 552.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 112.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1104.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_22485g0010 | |
| Cluster | HCCA clusters: Cluster_183 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 110016 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| At4g02750 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Orthogroups_2024-Update | |
| Bradi1g47170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g03730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi2g22840 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi2g23670 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g40080 | No alias | mitochondrial editing factor 19 | 0.04 | Orthogroups_2024-Update | |
| Bradi3g47510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi4g33270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi5g14000 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Brara.J02108.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G000674 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.05G078900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G288100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.20G155800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G015630.5 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G084530.3 | No alias | RNA editing factor *(SLO4) | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G101000.3 | No alias | RNA editing factor *(DEK36) | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_10426261g0020 | No alias | (at2g22070 : 612.0) pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
| MA_87646g0010 | No alias | (at3g02330 : 723.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00001689-RA | No alias | (at1g11290 : 570.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003011-RA | No alias | (at4g18750 : 444.0) Encodes a pentatricopeptide (PPR)... | 0.05 | Orthogroups_2024-Update | |
| PSME_00013800-RA | No alias | (at2g03880 : 405.0) Pentatricopeptide repeat (PPR)... | 0.11 | Orthogroups_2024-Update | |
| PSME_00018598-RA | No alias | (at1g11290 : 726.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00018763-RA | No alias | (at1g11290 : 389.0) Pentatricopeptide Repeat Protein... | 0.05 | Orthogroups_2024-Update | |
| PSME_00032004-RA | No alias | (at1g19720 : 530.0) Pentatricopeptide repeat (PPR-like)... | 0.06 | Orthogroups_2024-Update | |
| Seita.2G031700.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Seita.2G203300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.2G203900.1 | No alias | RNA editing factor *(OTP87) | 0.06 | Orthogroups_2024-Update | |
| Seita.7G205600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.7G324400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G477500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G172500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sopen02g026530 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |