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  5. MA_226001g0010

MA_226001g0010


Description : (at2g38290 : 636.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1272.0) & (original description: no original description)


Gene families : OG_42_0000450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_226001g0010
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
173475 No alias ammonium transporter 2 0.03 Orthogroups_2024-Update
Bradi1g02420 No alias ammonium transporter 2 0.1 Orthogroups_2024-Update
Bradi2g22670 No alias ammonium transporter 2 0.04 Orthogroups_2024-Update
Bradi3g45480 No alias ammonium transporter 2 0.02 Orthogroups_2024-Update
Glyma.05G196500 No alias ammonium transporter 2 0.03 Orthogroups_2024-Update
HORVU5Hr1G118590.1 No alias ammonium transporter *(AMT2/3) 0.05 Orthogroups_2024-Update
Kfl00008_0180 kfl00008_0180_v1.1 (at2g38290 : 498.0) encodes a high-affinity ammonium... 0.02 Orthogroups_2024-Update
Kfl00056_0140 kfl00056_0140_v1.1 (at2g38290 : 510.0) encodes a high-affinity ammonium... 0.03 Orthogroups_2024-Update
LOC_Os02g34580 No alias ammonium transporter protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00009457-RA No alias (at2g38290 : 553.0) encodes a high-affinity ammonium... 0.02 Orthogroups_2024-Update
PSME_00026874-RA No alias (at2g38290 : 513.0) encodes a high-affinity ammonium... 0.01 Orthogroups_2024-Update
PSME_00035364-RA No alias (at2g38290 : 600.0) encodes a high-affinity ammonium... 0.07 Orthogroups_2024-Update
PSME_00042558-RA No alias (at2g38290 : 588.0) encodes a high-affinity ammonium... 0.04 Orthogroups_2024-Update
Potri.001G305400 No alias ammonium transporter 2 0.03 Orthogroups_2024-Update
Potri.006G102800 No alias ammonium transporter 2 0.04 Orthogroups_2024-Update
Potri.018G033500 No alias ammonium transporter 2 0.04 Orthogroups_2024-Update
Potri.T000200 No alias ammonium transporter 2 0.02 Orthogroups_2024-Update
Seita.5G395800.1 No alias ammonium transporter *(AMT2/3) 0.04 Orthogroups_2024-Update
Sobic.009G168700.1 No alias ammonium transporter *(AMT2/3) 0.03 Orthogroups_2024-Update
Solyc03g033300 No alias Ammonium transporter (AHRD V3.3 *** K4BFK2_SOLLC) 0.02 Orthogroups_2024-Update
Solyc08g067080 No alias Ammonium transporter (AHRD V3.3 *** K4CLT4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc10g076480 No alias Ammonium transporter (AHRD V3.3 *** K4D1Z0_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA InterProScan predictions
BP GO:0015696 ammonium transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 25 446
No external refs found!