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No description available
Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc10g054430 | |
| Cluster | HCCA clusters: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os10g22160 | No alias | retrotransposon, putative, centromere-specific, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g27260 | No alias | transposon protein, putative, CACTA, En/Spm sub-class, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00024374-RA | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| Solyc11g028190 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc11g063750 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Sopen00g001490 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen00g009040 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g009050 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g027950 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
| Sopen02g004760 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen02g028910 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
| Sopen03g019160 | No alias | Reverse transcriptase-like | 0.03 | Orthogroups_2024-Update | |
| Sopen03g021300 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| Sopen04g007630 | No alias | Chromo (CHRromatin Organisation MOdifier) domain | 0.03 | Orthogroups_2024-Update | |
| Sopen05g016260 | No alias | Retroviral aspartyl protease | 0.03 | Orthogroups_2024-Update | |
| Sopen05g017540 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen05g017590 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
| Sopen05g018490 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen06g009540 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen06g011880 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen07g004930 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen07g012430 | No alias | Apocytochrome F, C-terminal | 0.04 | Orthogroups_2024-Update | |
| Sopen08g007650 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen08g011030 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen08g013300 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen08g027770 | No alias | Cytochrome P450 | 0.02 | Orthogroups_2024-Update | |
| Sopen09g008850 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen09g016630 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.04 | Orthogroups_2024-Update | |
| Sopen09g030490 | No alias | Retroviral aspartyl protease | 0.04 | Orthogroups_2024-Update | |
| Sopen10g008640 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
| Sopen11g012620 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen11g019830 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
| Sopen11g021290 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen11g022280 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen11g022720 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen11g023050 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen11g023740 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen12g011100 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen12g018380 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
| Sopen12g019980 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_3758.2 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |