Description : (at3g53740 : 142.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT2G37600.2); Has 756 Blast hits to 755 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 356; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (p52866|rl36_dauca : 113.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (reliability: 284.0) & (original description: no original description)
Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_24782g0010 | |
Cluster | HCCA clusters: Cluster_18 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
267958 | No alias | Ribosomal protein L36e family protein | 0.06 | Orthogroups_2024-Update | |
439710 | No alias | Ribosomal protein L36e family protein | 0.05 | Orthogroups_2024-Update | |
At5g02450 | No alias | 60S ribosomal protein L36-3... | 0.03 | Orthogroups_2024-Update | |
Bradi2g23260 | No alias | Ribosomal protein L36e family protein | 0.02 | Orthogroups_2024-Update | |
Brara.D02287.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.E00749.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Cre12.g484050 | No alias | Ribosomal protein L36e family protein | 0.05 | Orthogroups_2024-Update | |
GRMZM2G009936 | No alias | Ribosomal protein L36e family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.10G233900 | No alias | Ribosomal protein L36e family protein | 0.04 | Orthogroups_2024-Update | |
Mp1g05460.1 | No alias | component RPL36 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
PSME_00032528-RA | No alias | (at3g53740 : 137.0) Ribosomal protein L36e family... | 0.06 | Orthogroups_2024-Update | |
PSME_00032530-RA | No alias | (at3g53740 : 141.0) Ribosomal protein L36e family... | 0.03 | Orthogroups_2024-Update | |
Potri.012G142600 | No alias | Ribosomal protein L36e family protein | 0.05 | Orthogroups_2024-Update | |
Pp1s249_65V6 | No alias | 60s ribosomal protein l36-2 | 0.06 | Orthogroups_2024-Update | |
Pp1s84_102V6 | No alias | 60s ribosomal protein l36-2 | 0.06 | Orthogroups_2024-Update | |
Sobic.009G163800.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Solyc03g025520 | No alias | 60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc06g036050 | No alias | 60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen06g011800 | No alias | Ribosomal protein L36e | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00021493.69 | No alias | (at2g37600 : 127.0) Ribosomal protein L36e family... | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Predicted GO |
BP | GO:0006413 | translational initiation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Predicted GO |
BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Predicted GO |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Predicted GO |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
BP | GO:0071806 | protein transmembrane transport | IEP | Predicted GO |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Predicted GO |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000509 | Ribosomal_L36e | 8 | 101 |
No external refs found! |