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  5. MA_24849g0010

MA_24849g0010


Description : (at2g22070 : 610.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 140.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1220.0) & (original description: no original description)


Gene families : OG_42_0022300 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_24849g0010
Cluster HCCA clusters: Cluster_128


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 346
IPR002885 Pentatricopeptide_repeat 532 580
IPR002885 Pentatricopeptide_repeat 135 181
IPR002885 Pentatricopeptide_repeat 431 478
IPR002885 Pentatricopeptide_repeat 239 268
IPR002885 Pentatricopeptide_repeat 402 430
IPR002885 Pentatricopeptide_repeat 375 400
IPR002885 Pentatricopeptide_repeat 270 293
IPR002885 Pentatricopeptide_repeat 672 701
IPR002885 Pentatricopeptide_repeat 211 238
IPR002885 Pentatricopeptide_repeat 606 630
IPR032867 DYW_dom 705 841
No external refs found!