- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061DZK4_THECC)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc10g054730 | |
| Cluster | HCCA clusters: Cluster_229 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 114142 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 150748 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 88824 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At2g41080 | No alias | Pentatricopeptide repeat-containing protein At2g41080... | 0.04 | Orthogroups_2024-Update | |
| At3g46790 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g05610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g32290 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Brara.B03211.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G313300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| PSME_00002640-RA | No alias | (at4g13650 : 724.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00014882-RA | No alias | (at4g13650 : 307.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G272500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.3G075900.1 | No alias | RNA editing factor *(ECD1) | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G240900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G053100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G199400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G179000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.02 | Orthogroups_2024-Update | |
| Sopen01g032720 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen01g041720 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00001038.5 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| No external refs found! |