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  5. Solyc10g054760

Solyc10g054760


Description : Small auxin up-regulated RNA80


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g054760

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G126600 No alias SAUR-like auxin-responsive protein family 0.02 Orthogroups_2024-Update
LOC_Os06g48860 No alias OsSAUR28 - Auxin-responsive SAUR gene family member, expressed 0.02 Orthogroups_2024-Update
Solyc01g110860 No alias SAUR-like auxin-responsive protein family (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g110900 No alias SAUR-like auxin-responsive protein family (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen01g052970 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 14 93
No external refs found!