MA_26383g0010


Description : (at3g06720 : 580.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q9slx0|ima1b_orysa : 568.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (reliability: 1160.0) & (original description: no original description)


Gene families : OG_42_0000552 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_26383g0010
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
At5g49310 No alias Importin subunit alpha-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ09] 0.03 Orthogroups_2024-Update
PSME_00007271-RA No alias (at3g06720 : 573.0) Encodes importin alpha involved in... 0.01 Orthogroups_2024-Update
evm.model.tig00021721.27 No alias (q71vm4|ima1a_orysa : 650.0) Importin alpha-1a subunit -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006606 protein import into nucleus IEA InterProScan predictions
MF GO:0061608 nuclear import signal receptor activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004107 chorismate synthase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 400 437
IPR000225 Armadillo 357 393
IPR000225 Armadillo 148 185
IPR000225 Armadillo 313 354
IPR000225 Armadillo 104 144
IPR002652 Importin-a_IBB 13 92
IPR032413 Arm_3 442 489
No external refs found!