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  5. MA_276701g0010

MA_276701g0010


Description : (at2g45660 : 110.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 107.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 220.0) & (original description: no original description)


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_276701g0010
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
At1g22130 No alias Agamous-like MADS-box protein AGL104... 0.03 Orthogroups_2024-Update
At2g45650 No alias AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3] 0.03 Orthogroups_2024-Update
At4g36590 No alias MADS-box protein [Source:UniProtKB/TrEMBL;Acc:O23222] 0.03 Orthogroups_2024-Update
Brara.C04211.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.C04259.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J01588.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
HORVU1Hr1G029220.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G047560.2 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
HORVU1Hr1G063620.2 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.02 Orthogroups_2024-Update
PSME_00043819-RA No alias (at4g16370 : 692.0) Encodes an oligopeptide transporter... 0.03 Orthogroups_2024-Update
Potri.008G098400 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.014G074100 No alias AGAMOUS-like 6 0.03 Orthogroups_2024-Update
Seita.5G404600.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
Sobic.004G191901.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g103550 No alias LOW QUALITY:Transcription factor, MADS-box (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!