Solyc10g055120

Description : Nucleotide binding site-leucine rich repeat protein (AHRD V3.3 *** A0A0H5AGV4_SOLPI)

Gene families : OG_42_0000335 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc10g055120
Cluster	HCCA clusters: Cluster_309

Target	Alias	Description	ECC score	Gene Family Method
Glyma.01G072450	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
LOC_Os11g29090	No alias	NB-ARC/LRR disease resistance protein, putative, expressed	0.02	Orthogroups_2024-Update
Solyc10g050050	No alias	LOW QUALITY:Nucleotide binding site-leucine rich repeat...	0.03	Orthogroups_2024-Update
Solyc10g055170	No alias	LOW QUALITY:Disease resistance protein (CC-NBS-LRR...	0.02	Orthogroups_2024-Update
Solyc10g074640	No alias	Disease resistance protein (AHRD V3.3 - W9R179_9ROSA)	0.02	Orthogroups_2024-Update
Sopen03g024960	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
BP	GO:0006471	protein ADP-ribosylation	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
CC	GO:0009317	acetyl-CoA carboxylase complex	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016421	CoA carboxylase activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	6	78

External Links

No external refs found!