1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g055140

Solyc10g055140


Description : Nucleotide binding site-leucine rich repeat protein (AHRD V3.3 *** C8BNN4_SOLLC)


Gene families : OG_42_0000335 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g055140
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Solyc07g044790 No alias Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) 0.03 Orthogroups_2024-Update
Solyc10g050050 No alias LOW QUALITY:Nucleotide binding site-leucine rich repeat... 0.05 Orthogroups_2024-Update
Solyc10g055170 No alias LOW QUALITY:Disease resistance protein (CC-NBS-LRR... 0.02 Orthogroups_2024-Update
Solyc12g044180 No alias CC-NBS-LRR disease resistance protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen03g024960 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 7 212
No external refs found!