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  5. Solyc10g055170

Solyc10g055170


Description : LOW QUALITY:Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *-* A0A072VSK9_MEDTR)


Gene families : OG_42_0000335 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g055170
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Glyma.U031514 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.001G429600 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T065900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Solyc10g055120 No alias Nucleotide binding site-leucine rich repeat protein... 0.02 Orthogroups_2024-Update
Solyc10g055140 No alias Nucleotide binding site-leucine rich repeat protein... 0.02 Orthogroups_2024-Update
Solyc12g044170 No alias No description available 0.03 Orthogroups_2024-Update
Sopen10g029280 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 6 43
IPR002182 NB-ARC 78 113
No external refs found!