1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_311439g0010

MA_311439g0010


Description : (p25011|ccnb1_soybn : 311.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (at5g06150 : 296.0) Encodes a cyclin whose expression is reduced in response to high salt.; CYC1BAT; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B1;3 (TAIR:AT3G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description)


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_311439g0010
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
At1g47220 No alias Cyclin-A3-3 [Source:UniProtKB/Swiss-Prot;Acc:A0MEB5] 0.04 Orthogroups_2024-Update
At1g47230 No alias Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2] 0.04 Orthogroups_2024-Update
Bradi2g52760 No alias Cyclin family protein 0.02 Orthogroups_2024-Update
Brara.H02529.1 No alias regulatory protein *(CYCA) of cell cycle 0.02 Orthogroups_2024-Update
Glyma.06G044000 No alias Cyclin A3;1 0.02 Orthogroups_2024-Update
HORVU0Hr1G026010.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
HORVU7Hr1G121820.2 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
LOC_Os05g14730 No alias cyclin-A1, putative, expressed 0.02 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00007565-RA No alias (p30278|ccnb2_medsa : 260.0) G2/mitotic-specific... 0.03 Orthogroups_2024-Update
Potri.005G251400 No alias CYCLIN B2;4 0.03 Orthogroups_2024-Update
Potri.010G173200 No alias cyclin b3;1 0.03 Orthogroups_2024-Update
Sobic.006G179200.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 251 377
IPR004367 Cyclin_C-dom 379 495
IPR004367 Cyclin_C-dom 65 162
No external refs found!