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  5. MA_311559g0010

MA_311559g0010


Description : (at3g52450 : 124.0) Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 22 (PUB22); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 23 (TAIR:AT2G35930.1); Has 2414 Blast hits to 2402 proteins in 185 species: Archae - 0; Bacteria - 30; Metazoa - 243; Fungi - 90; Plants - 1816; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_311559g0010
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
105050 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
A4A49_34426 No alias e3 ubiquitin-protein ligase pub24 0.02 Orthogroups_2024-Update
At3g18710 No alias RING-type E3 ubiquitin transferase... 0.02 Orthogroups_2024-Update
Brara.C03388.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.D00589.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G077120.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
Pp1s356_21V6 No alias F11F19.16; U-box domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G186200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G367000.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sopen04g026970 No alias U-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0019013 viral nucleocapsid IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044423 virion part IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!