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  5. MA_31230g0020

MA_31230g0020


Description : (at1g27200 : 419.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)


Gene families : OG_42_0001134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_31230g0020
Cluster HCCA clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
174648 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
Glyma.18G130100 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
LOC_Os08g02850 No alias zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00054268-RA No alias (at4g37420 : 346.0) Domain of unknown function (DUF23);... 0.03 Orthogroups_2024-Update
Solyc02g093750 No alias C3H4 type zinc finger protein (DUF23) (AHRD V3.3 *** AT5G40720.3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 306 541
No external refs found!