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  5. MA_34668g0010

MA_34668g0010


Description : (at5g10200 : 169.0) ARM-repeat/Tetratricopeptide repeat (TPR)-like protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (TAIR:AT5G43120.1); Has 2055 Blast hits to 1944 proteins in 240 species: Archae - 0; Bacteria - 3; Metazoa - 1049; Fungi - 393; Plants - 364; Viruses - 4; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0002307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002307_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_34668g0010
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Brara.J02332.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!