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  5. MA_354015g0010

MA_354015g0010


Description : (at1g05200 : 251.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 228.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_354015g0010
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Bradi3g01620 No alias glutamate receptor 3.3 0.03 Orthogroups_2024-Update
PSME_00027644-RA No alias (at2g29120 : 490.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00033212-RA No alias (at1g42540 : 242.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
Potri.018G096500 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
Sobic.010G231300.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Sopen01g054310 No alias Receptor family ligand binding region 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 34 338
IPR001320 Iontro_rcpt 339 369
No external refs found!