MA_355252g0010

Description : (at4g26090 : 192.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description)

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_355252g0010
Cluster	HCCA clusters: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
MA_10321737g0010	No alias	(at5g05400 : 123.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
MA_10436120g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00000174-RA	No alias	(at1g63350 : 147.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00011883-RA	No alias	(at4g27220 : 218.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
PSME_00033120-RA	No alias	(at1g63350 : 267.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00043732-RA	No alias	(at1g12220 : 228.0) Resistance gene, mediates resistance...	0.03	Orthogroups_2024-Update
PSME_00048940-RA	No alias	(at4g27220 : 141.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
PSME_00051384-RA	No alias	(at1g63350 : 167.0) Disease resistance protein...	0.04	Orthogroups_2024-Update
PSME_00056632-RA	No alias	(at1g61310 : 186.0) LRR and NB-ARC domains-containing...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	225	350
IPR001611	Leu-rich_rpt	512	572

External Links

No external refs found!

MA_355252g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation