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  5. MA_361391g0010

MA_361391g0010


Description : (at1g07900 : 123.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_361391g0010
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
A4A49_25203 No alias lob domain-containing protein 11 0.04 Orthogroups_2024-Update
At2g30130 No alias PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1] 0.03 Orthogroups_2024-Update
Bradi2g25270 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Bradi4g44850 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Brara.B03241.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G01383.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I05333.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Glyma.10G213500 No alias LOB domain-containing protein 1 0.02 Orthogroups_2024-Update
Glyma.15G127900 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.18G058000 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
LOC_Os08g06659 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_16891g0020 No alias (at5g63090 : 162.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
MA_9412105g0010 No alias (at2g40470 : 200.0) LOB domain-containing protein 15... 0.04 Orthogroups_2024-Update
MA_9924708g0010 No alias (at1g31320 : 131.0) LOB domain-containing protein 4... 0.04 Orthogroups_2024-Update
Potri.001G081400 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc06g075330 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen11g004610 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 22 119
No external refs found!