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  5. MA_368556g0010

MA_368556g0010


Description : (at4g27030 : 261.0) Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol.; fatty acid desaturase A (FADA); FUNCTIONS IN: Delta 3-trans hexadecenoic acid phosphatidylglycerol desaturase activity; INVOLVED IN: response to karrikin, phosphatidylglycerol metabolic process, unsaturated fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: Kua-ubiquitin conjugating enzyme hybrid localisation domain (TAIR:AT1G62190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)


Gene families : OG_42_0005180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005180_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_368556g0010
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
77032 No alias fatty acid desaturase A 0.03 Orthogroups_2024-Update
Glyma.18G099500 No alias fatty acid desaturase A 0.02 Orthogroups_2024-Update
HORVU6Hr1G020060.1 No alias trans-delta-3-hexadecenoic acid phosphatidylglycerol... 0.03 Orthogroups_2024-Update
Potri.001G424700 No alias fatty acid desaturase A 0.04 Orthogroups_2024-Update
Pp1s5_162V6 No alias F10M23.370; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc07g064410 No alias Kua-ubiquitin conjugating enzyme hybrid, localization... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR019547 TMEM189_B_dmain 132 300
No external refs found!