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  5. MA_37256g0010

MA_37256g0010


Description : (at4g01680 : 233.0) Encodes a putative transcription factor (MYB55).; myb domain protein 55 (MYB55); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20027|myb3_horvu : 192.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 466.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_37256g0010
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.06 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
At1g06180 No alias Transcription factor MYB13... 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Brara.A03909.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Brara.C01651.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
Brara.F02110.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.K01188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G211500 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Glyma.04G004100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.05G109200 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.07G008500 No alias myb domain protein 26 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.05 Orthogroups_2024-Update
Glyma.10G236600 No alias myb domain protein 45 0.06 Orthogroups_2024-Update
Glyma.13G333200 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.14G069100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.03 Orthogroups_2024-Update
Glyma.17G085600 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
HORVU1Hr1G051980.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g54520 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g31470 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.03 Orthogroups_2024-Update
MA_139238g0010 No alias (at1g09540 : 266.0) Encodes putative transcription... 0.04 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.03 Orthogroups_2024-Update
MA_17672g0010 No alias (at5g65790 : 222.0) Encodes a putative MYB transcription... 0.05 Orthogroups_2024-Update
MA_20462g0010 No alias (at2g32460 : 219.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_33964g0010 No alias (at5g16600 : 262.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_74671g0010 No alias (p20025|myb38_maize : 203.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
Potri.001G036000 No alias myb domain protein 65 0.03 Orthogroups_2024-Update
Potri.006G170800 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.05 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.05 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.04 Orthogroups_2024-Update
Pp1s46_302V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.05 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G199800.1 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.03 Orthogroups_2024-Update
Solyc12g096200 No alias R2R3MYB transcription factor 6 0.03 Orthogroups_2024-Update
Solyc12g099130 No alias R2R3MYB transcription factor 108 0.03 Orthogroups_2024-Update
Sopen03g004680 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g001300 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!