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  5. MA_37537g0020

MA_37537g0020


Description : (at4g26690 : 394.0) Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.; SHAVEN 3 (SHV3); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: SHV3-like 2 (TAIR:AT1G66970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 788.0) & (original description: no original description)


Gene families : OG_42_0000724 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_37537g0020
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
MA_34216g0010 No alias (at5g55480 : 472.0) Glycerophosphoryl diester... 0.04 Orthogroups_2024-Update
PSME_00022954-RA No alias (at1g66970 : 201.0) SHV3-like 2 (SVL2); FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
Seita.1G213900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G133500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
MF GO:0008081 phosphoric diester hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 332 373
IPR030395 GP_PDE_dom 17 304
No external refs found!