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  5. MA_38486g0010

MA_38486g0010


Description : (at1g30440 : 647.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G03250.1); Has 895 Blast hits to 867 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 883; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (q5ks50|nph3_orysa : 397.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1294.0) & (original description: no original description)


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_38486g0010
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G237100 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.09G085200 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s203_13V6 No alias transposon protein mutator sub-class 0.03 Orthogroups_2024-Update
Pp1s31_204V6 No alias root phototropism 0.03 Orthogroups_2024-Update
Solyc03g044090 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 26 129
IPR027356 NPH3_dom 211 472
No external refs found!