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  5. MA_3905g0020

MA_3905g0020


Description : no hits & (original description: no original description)


Gene families : OG_42_0001839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_3905g0020
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
At2g27840 No alias Histone deacetylase HDT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4T3] 0.03 Orthogroups_2024-Update
Brara.C01007.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.04 Orthogroups_2024-Update
Brara.D01665.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.03 Orthogroups_2024-Update
Glyma.11G189500 No alias histone deacetylase 2B 0.03 Orthogroups_2024-Update
Glyma.12G181400 No alias histone deacetylase 2C 0.03 Orthogroups_2024-Update
Glyma.13G319500 No alias histone deacetylase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!