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  5. MA_40671g0010

MA_40671g0010


Description : (q40636|expa2_orysa : 346.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (at2g37640 : 342.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; EXP3; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2147 Blast hits to 2144 proteins in 153 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 34; Plants - 2079; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 684.0) & (original description: no original description)


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_40671g0010
Cluster HCCA clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
A4A49_04302 No alias expansin-a10 0.03 Orthogroups_2024-Update
A4A49_27627 No alias expansin-a4 0.03 Orthogroups_2024-Update
At5g39270 No alias Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80] 0.03 Orthogroups_2024-Update
Brara.F03107.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Cre03.g177800 No alias expansin A1 0.02 Orthogroups_2024-Update
GRMZM2G094523 No alias expansin A1 0.04 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.03 Orthogroups_2024-Update
Glyma.06G195000 No alias expansin A15 0.02 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g16839 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429288g0020 No alias (at3g55500 : 259.0) expansin-like protein. Naming... 0.04 Orthogroups_2024-Update
Mp3g03890.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
PSME_00052085-RA No alias (at1g69530 : 372.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Pp1s363_2V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Seita.3G204900.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sopen02g032810 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
BP GO:0009405 pathogenesis IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 241
IPR009009 RlpA-like_DPBB 66 153
No external refs found!