Description : (at2g35930 : 239.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (q64ha9|spl11_orysa : 139.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: no original description)
Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_410546g0010 | |
Cluster | HCCA clusters: Cluster_92 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g49780 | No alias | U-box domain-containing protein 26... | 0.04 | Orthogroups_2024-Update | |
Brara.E02326.1 | No alias | E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G071484 | No alias | plant U-box 22 | 0.02 | Orthogroups_2024-Update | |
Glyma.02G196301 | No alias | plant U-box 24 | 0.05 | Orthogroups_2024-Update | |
Glyma.07G106000 | No alias | ARM repeat superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.14G212200 | No alias | CYS, MET, PRO, and GLY protein 1 | 0.04 | Orthogroups_2024-Update | |
PSME_00056652-RA | No alias | (at2g35930 : 195.0) Encodes a cytoplasmically localized... | 0.04 | Orthogroups_2024-Update | |
PSME_00056761-RA | No alias | (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... | 0.04 | Orthogroups_2024-Update | |
Potri.007G110600 | No alias | ARM repeat superfamily protein | 0.03 | Orthogroups_2024-Update | |
Sobic.001G441100.1 | No alias | E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Solyc04g071030 | No alias | U-box domain-containing family protein (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
Sopen05g034900 | No alias | U-box domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | InterProScan predictions |
BP | GO:0016567 | protein ubiquitination | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Predicted GO |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 8 | 77 |
No external refs found! |