1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_412995g0010

MA_412995g0010


Description : (at1g05260 : 271.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p22195|per1_arahy : 261.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 534.0) & (original description: no original description)


Gene families : OG_42_0000163 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_412995g0010
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G076562 No alias Peroxidase superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G051740.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g04470 No alias peroxidase precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433564g0020 No alias (p22196|per2_arahy : 256.0) Cationic peroxidase 2... 0.04 Orthogroups_2024-Update
Mp1g06830.1 No alias Peroxidase 3 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp3g22000.1 No alias Peroxidase 1 OS=Oryza sativa subsp. japonica... 0.02 Orthogroups_2024-Update
Mp4g14270.1 No alias Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 234.0) 0.02 Orthogroups_2024-Update
Mp5g17110.1 No alias Peroxidase 39 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp6g18300.1 No alias Peroxidase 3 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.012G006800 No alias Peroxidase superfamily protein 0.02 Orthogroups_2024-Update
Sobic.009G055100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G055300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan predictions
BP GO:0006979 response to oxidative stress IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase_pln/fun/bac 58 301
No external refs found!