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  5. MA_42031g0010

MA_42031g0010


Description : (at2g41510 : 595.0) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase/dehydrogenase 1 (CKX1); FUNCTIONS IN: cytokinin dehydrogenase activity; INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development; LOCATED IN: vacuole; EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6 (TAIR:AT3G63440.1); Has 6769 Blast hits to 6763 proteins in 1376 species: Archae - 168; Bacteria - 3882; Metazoa - 142; Fungi - 1302; Plants - 645; Viruses - 0; Other Eukaryotes - 630 (source: NCBI BLink). & (q9t0n8|ckx1_maize : 427.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 1190.0) & (original description: no original description)


Gene families : OG_42_0000398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_42031g0010
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G055600 No alias cytokinin oxidase 7 0.04 Orthogroups_2024-Update
Glyma.09G063900 No alias cytokinin oxidase 3 0.04 Orthogroups_2024-Update
MA_32541g0010 No alias (at5g21482 : 451.0) This gene used to be called AtCKX5.... 0.03 Orthogroups_2024-Update
PSME_00031885-RA No alias (at5g21482 : 469.0) This gene used to be called AtCKX5.... 0.03 Orthogroups_2024-Update
PSME_00037000-RA No alias (at1g75450 : 473.0) This gene used to be called AtCKX6.... 0.04 Orthogroups_2024-Update
Potri.006G047900 No alias cytokinin oxidase/dehydrogenase 1 0.02 Orthogroups_2024-Update
Sobic.007G151400.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.02 Orthogroups_2024-Update
Sopen10g006890 No alias FAD binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009690 cytokinin metabolic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0019139 cytokinin dehydrogenase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 81 223
IPR015345 Cytokinin_DH_FAD/cytokin-bd 255 533
No external refs found!