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  5. MA_42116g0010

MA_42116g0010


Description : (at1g03560 : 678.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 53521 Blast hits to 15193 proteins in 316 species: Archae - 3; Bacteria - 91; Metazoa - 613; Fungi - 824; Plants - 50230; Viruses - 0; Other Eukaryotes - 1760 (source: NCBI BLink). & (q76c99|rf1_orysa : 213.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1356.0) & (original description: no original description)


Gene families : OG_42_0009561 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009561_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_42116g0010
Cluster HCCA clusters: Cluster_7


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 197 226
IPR002885 Pentatricopeptide_repeat 301 330
IPR002885 Pentatricopeptide_repeat 337 365
IPR002885 Pentatricopeptide_repeat 581 607
IPR002885 Pentatricopeptide_repeat 368 417
IPR002885 Pentatricopeptide_repeat 474 522
IPR002885 Pentatricopeptide_repeat 228 277
IPR002885 Pentatricopeptide_repeat 540 571
IPR002885 Pentatricopeptide_repeat 435 467
No external refs found!