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Description : (at4g02750 : 605.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 152.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1210.0) & (original description: no original description)
Gene families : OG_42_0118387 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_433875g0010 | |
| Cluster | HCCA clusters: Cluster_7 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 59 | 98 |
| IPR002885 | Pentatricopeptide_repeat | 646 | 693 |
| IPR002885 | Pentatricopeptide_repeat | 156 | 181 |
| IPR002885 | Pentatricopeptide_repeat | 342 | 370 |
| IPR002885 | Pentatricopeptide_repeat | 373 | 402 |
| IPR002885 | Pentatricopeptide_repeat | 218 | 246 |
| IPR002885 | Pentatricopeptide_repeat | 485 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 516 | 545 |
| IPR002885 | Pentatricopeptide_repeat | 435 | 451 |
| IPR002885 | Pentatricopeptide_repeat | 249 | 278 |
| IPR002885 | Pentatricopeptide_repeat | 454 | 482 |
| IPR002885 | Pentatricopeptide_repeat | 187 | 216 |
| IPR002885 | Pentatricopeptide_repeat | 547 | 573 |
| IPR002885 | Pentatricopeptide_repeat | 405 | 432 |
| IPR002885 | Pentatricopeptide_repeat | 721 | 744 |
| IPR002885 | Pentatricopeptide_repeat | 280 | 309 |
| IPR002885 | Pentatricopeptide_repeat | 311 | 338 |
| No external refs found! |