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  5. MA_437839g0010

MA_437839g0010


Description : (at5g21274 : 142.0) Encodes a calmodulin isoform. Expressed in leaves.; calmodulin 6 (CAM6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34463 Blast hits to 23268 proteins in 1758 species: Archae - 4; Bacteria - 213; Metazoa - 14512; Fungi - 7798; Plants - 6959; Viruses - 0; Other Eukaryotes - 4977 (source: NCBI BLink). & (p04353|calm_spiol : 142.0) Calmodulin (CaM) - Spinacia oleracea (Spinach) & (reliability: 284.0) & (original description: no original description)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_437839g0010
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
A4A49_24311 No alias calmodulin-like protein 8 0.03 Orthogroups_2024-Update
Bradi1g64020 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Bradi2g10010 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Bradi2g21460 No alias calmodulin 5 0.03 Orthogroups_2024-Update
Brara.D00328.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
GRMZM2G146720 No alias calmodulin 5 0.04 Orthogroups_2024-Update
GRMZM2G152891 No alias calmodulin 5 0.02 Orthogroups_2024-Update
GRMZM2G395244 No alias calmodulin 5 0.04 Orthogroups_2024-Update
LOC_Os11g37550 No alias OsCML6 - Calmodulin-related calcium sensor protein, expressed 0.03 Orthogroups_2024-Update
MA_758443g0010 No alias (at5g21274 : 102.0) Encodes a calmodulin isoform.... 0.03 Orthogroups_2024-Update
PSME_00011179-RA No alias (at2g41110 : 209.0) Encodes a touch-inducible calmodulin... 0.03 Orthogroups_2024-Update
Seita.7G311400.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Solyc06g053930 No alias Calmodulin, putative (AHRD V3.3 *** B9RTI5_RICCO) 0.03 Orthogroups_2024-Update
evm.model.contig_2024.16 No alias (p05434|catr_chlre : 126.0) Caltractin (Centrin) (20 kDa... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 3 63
No external refs found!