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  5. MA_459495g0010

MA_459495g0010


Description : (at1g60790 : 280.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 2 (TBL2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G06700.1); Has 1368 Blast hits to 1349 proteins in 34 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 0; Plants - 1355; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description)


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_459495g0010
Cluster HCCA clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
A4A49_19062 No alias protein trichome birefringence-like 10 0.02 Orthogroups_2024-Update
Glyma.17G016100 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Orthogroups_2024-Update
HORVU1Hr1G007630.1 No alias rhamnogalacturonan-I O-acetyltransferase *(TBL) 0.03 Orthogroups_2024-Update
MA_10436441g0010 No alias (at3g12060 : 362.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
PSME_00020911-RA No alias (at5g06700 : 355.0) Encodes a member of the TBL... 0.04 Orthogroups_2024-Update
PSME_00044830-RA No alias (at3g12060 : 356.0) Encodes a member of the TBL... 0.04 Orthogroups_2024-Update
Pp1s390_21V6 No alias af361591_1 at5g06230 mbl20_11 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 138 190
IPR026057 PC-Esterase 191 450
IPR026057 PC-Esterase 457 573
No external refs found!