MA_46026g0020

Description : (at4g03210 : 242.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41638|xtha_phaan : 223.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 484.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_46026g0020
Cluster	HCCA clusters: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21656	No alias	xyloglucan endotransglucosylasehydrolase protein 24	0.03	Orthogroups_2024-Update
A4A49_30032	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.02	Orthogroups_2024-Update
A4A49_36014	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.02	Orthogroups_2024-Update
Bradi1g33810	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.03	Orthogroups_2024-Update
Brara.A01575.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
Brara.F01864.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.03	Orthogroups_2024-Update
Glyma.12G178000	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.02	Orthogroups_2024-Update
LOC_Os03g01800	No alias	glycosyl hydrolases family 16, putative, expressed	0.03	Orthogroups_2024-Update
MA_146337g0020	No alias	(at5g13870 : 266.0) EXGT-A4, endoxyloglucan...	0.03	Orthogroups_2024-Update
MA_20669g0010	No alias	(at2g36870 : 290.0) xyloglucan...	0.04	Orthogroups_2024-Update
MA_476450g0010	No alias	(at5g65730 : 440.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00009507-RA	No alias	(at3g23730 : 294.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00009509-RA	No alias	(at5g57530 : 295.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00011813-RA	No alias	(at5g57560 : 322.0) Encodes a cell wall-modifying...	0.03	Orthogroups_2024-Update
PSME_00019699-RA	No alias	(q39857\|xth_soybn : 456.0) Probable xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00025833-RA	No alias	(at5g65730 : 294.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00033686-RA	No alias	(at2g36870 : 309.0) xyloglucan...	0.02	Orthogroups_2024-Update
PSME_00036332-RA	No alias	(at2g36870 : 292.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00040364-RA	No alias	(at4g03210 : 145.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00045375-RA	No alias	(p93349\|xth_tobac : 273.0) Probable xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00045798-RA	No alias	(at2g36870 : 301.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00050857-RA	No alias	(q41638\|xtha_phaan : 372.0) Xyloglucan...	0.03	Orthogroups_2024-Update
Potri.001G071000	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
Potri.003G159700	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.04	Orthogroups_2024-Update
Pp1s193_16V6	No alias	MAC12.33; xyloglucan endotransglycosylase (EXGT-A4)...	0.03	Orthogroups_2024-Update
Pp1s19_35V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Seita.8G142000.1	No alias	EC_2.4 glycosyltransferase	0.04	Orthogroups_2024-Update
Solyc03g093080	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc03g093110	No alias	xyloglucan endotransglucosylase-hydrolase	0.03	Orthogroups_2024-Update
Solyc03g093120	No alias	xyloglucan endotransglucosylase-hydrolase	0.03	Orthogroups_2024-Update
Solyc03g093130	No alias	xyloglucan endotransglucosylase-hydrolase 3	0.03	Orthogroups_2024-Update
Solyc07g006860	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc07g055990	No alias	Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1...	0.03	Orthogroups_2024-Update
Sopen03g023920	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update
Sopen07g029350	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004107	chorismate synthase activity	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006606	protein import into nucleus	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Predicted GO
BP	GO:0015031	protein transport	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015833	peptide transport	IEP	Predicted GO
BP	GO:0016197	endosomal transport	IEP	Predicted GO
BP	GO:0016482	cytosolic transport	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
CC	GO:0030906	retromer, cargo-selective complex	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
BP	GO:0034504	protein localization to nucleus	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
BP	GO:0042886	amide transport	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051170	import into nucleus	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
MF	GO:0140104	molecular carrier activity	IEP	Predicted GO
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010713	XET_C	243	288
IPR000757	GH16	94	144
IPR000757	GH16	13	92
IPR000757	GH16	165	218

External Links

No external refs found!

MA_46026g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation