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  5. MA_46360g0010

MA_46360g0010


Description : (at2g36830 : 328.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 316.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: no original description)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_46360g0010
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Bradi2g62520 No alias tonoplast intrinsic protein 1;3 0.02 Orthogroups_2024-Update
GRMZM2G037327 No alias tonoplast intrinsic protein 1;3 0.02 Orthogroups_2024-Update
GRMZM2G103983 No alias Aquaporin-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G160500 No alias Aquaporin-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G034000 No alias tonoplast intrinsic protein 2;3 0.03 Orthogroups_2024-Update
Glyma.13G333100 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
LOC_Os01g13120 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g13130 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g74450 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g35050 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00027610-RA No alias (at3g16240 : 298.0) Delta tonoplast intrinsic protein,... 0.04 Orthogroups_2024-Update
Seita.1G259800.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
Solyc06g060760 No alias tonoplast intrinsic protein 2.3 0.04 Orthogroups_2024-Update
Sopen03g039350 No alias Major intrinsic protein 0.03 Orthogroups_2024-Update
Sopen06g020880 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update
Sopen06g032050 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 16 234
No external refs found!