Description : RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc01g096650 | |
Cluster | HCCA clusters: Cluster_261 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_29026 | No alias | ring-h2 finger protein atl60 | 0.04 | Orthogroups_2024-Update | |
A4A49_29196 | No alias | ring-h2 finger protein atl72 | 0.02 | Orthogroups_2024-Update | |
A4A49_30300 | No alias | ring-h2 finger protein atl54 | 0.03 | Orthogroups_2024-Update | |
A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.03 | Orthogroups_2024-Update | |
At1g72220 | No alias | RING-H2 finger protein ATL54... | 0.03 | Orthogroups_2024-Update | |
At2g42360 | No alias | E3 ubiquitin-protein ligase ATL41... | 0.03 | Orthogroups_2024-Update | |
At4g40070 | No alias | RING-H2 finger protein ATL32... | 0.03 | Orthogroups_2024-Update | |
At5g01880 | No alias | RING-H2 finger protein ATL74... | 0.03 | Orthogroups_2024-Update | |
Bradi2g49152 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi3g44733 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.B02007.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.F02864.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.G00998.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.I04147.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
GRMZM2G075782 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.06G143100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G231400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G108500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G231900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU0Hr1G016510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G028260.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G082740.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G061040.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G120910.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G121570.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g52210 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g45060 | No alias | RING-H2 finger protein ATL2M, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_124750g0010 | No alias | (at5g01880 : 92.8) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_17390g0010 | No alias | (at3g61550 : 149.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_786911g0010 | No alias | (at1g53820 : 92.8) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.005G113200 | No alias | receptor homology region transmembrane domain ring H2... | 0.02 | Orthogroups_2024-Update | |
Potri.005G244800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.010G235200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.019G010500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Pp1s85_173V6 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Seita.1G005000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.8G189600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.9G336200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G305000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.010G157300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Solyc10g011880 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) | 0.03 | Orthogroups_2024-Update | |
Solyc12g087840 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Sopen06g017190 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0004143 | diacylglycerol kinase activity | IEP | Predicted GO |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006359 | regulation of transcription by RNA polymerase III | IEP | Predicted GO |
BP | GO:0006413 | translational initiation | IEP | Predicted GO |
BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Predicted GO |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
BP | GO:0016049 | cell growth | IEP | Predicted GO |
BP | GO:0016480 | negative regulation of transcription by RNA polymerase III | IEP | Predicted GO |
BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
CC | GO:0031225 | anchored component of membrane | IEP | Predicted GO |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predicted GO |
MF | GO:0031369 | translation initiation factor binding | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0040007 | growth | IEP | Predicted GO |
BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Predicted GO |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 104 | 148 |
No external refs found! |