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Description : (at3g16240 : 316.0) Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.; delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink). & (p21653|tip1_tobac : 310.0) Probable aquaporin TIP-type RB7-5A (Tonoplast intrinsic protein, root-specific RB7-5A) (TobRB7) (RT-TIP) - Nicotiana tabacum (Common tobacco) & (reliability: 632.0) & (original description: no original description)
Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_467865g0010 | |
| Cluster | HCCA clusters: Cluster_221 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_31640 | No alias | aquaporin tip1-1 | 0.03 | Orthogroups_2024-Update | |
| Bradi2g07810 | No alias | tonoplast intrinsic protein 4;1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G333100 | No alias | tonoplast intrinsic protein 1;3 | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g35050 | No alias | aquaporin protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp1g20890.1 | No alias | tonoplast intrinsic protein (TIP) | 0.02 | Orthogroups_2024-Update | |
| Mp6g11780.1 | No alias | tonoplast intrinsic protein (TIP) | 0.03 | Orthogroups_2024-Update | |
| PSME_00009069-RA | No alias | (at2g36830 : 317.0) Encodes a tonoplast intrinsic... | 0.04 | Orthogroups_2024-Update | |
| PSME_00033210-RA | No alias | (at3g16240 : 295.0) Delta tonoplast intrinsic protein,... | 0.06 | Orthogroups_2024-Update | |
| PSME_00033803-RA | No alias | (at2g36830 : 323.0) Encodes a tonoplast intrinsic... | 0.05 | Orthogroups_2024-Update | |
| Potri.001G235300 | No alias | tonoplast intrinsic protein 1;3 | 0.04 | Orthogroups_2024-Update | |
| Pp1s212_90V6 | No alias | mip tip subfamily | 0.02 | Orthogroups_2024-Update | |
| Seita.5G007500.1 | No alias | tonoplast intrinsic protein *(TIP) | 0.02 | Orthogroups_2024-Update | |
| Seita.9G541300.1 | No alias | tonoplast intrinsic protein *(TIP) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0015267 | channel activity | IEA | InterProScan predictions |
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000425 | MIP | 63 | 280 |
| No external refs found! |